skbio.math.gradient.AverageGradientANOVA

class skbio.math.gradient.AverageGradientANOVA(coords, prop_expl, metadata_map, trajectory_categories=None, sort_category=None, axes=3, weighted=False)[source]

Perform trajectory analysis using the RMS average algorithm

For each group in a category, it computes the average point among the samples in such group and then computes the norm of each sample from the averaged one.

See also

GradientANOVA

Methods

get_trajectories() Compute the trajectories for each group in each category and run ANOVA over the results to test group independence.