scikit-bio docs
0.1.4
Site
Sequence collections and alignments (
skbio.core.alignment
)
Biological sequences (
skbio.core.sequence
)
Dissimilarity and distance matrices (
skbio.core.distance
)
Exceptions (
skbio.core.exception
)
Warnings (
skbio.core.warning
)
Genetic Code (
skbio.core.genetic_code
)
Tree representations (
skbio.core.tree
)
Constructing workflows (
skbio.core.workflow
)
Distribution visualizations (
skbio.draw.distributions
)
Format biological sequences (
skbio.format.sequences
)
Alpha diversity measures (
skbio.math.diversity.alpha
)
Beta diversity measures (
skbio.math.diversity.beta
)
Distance-based statistics (
skbio.math.stats.distance
)
Miscellaneous statistics utilities (
skbio.math.stats.misc
)
Ordination methods (
skbio.math.stats.ordination
)
Spatial Statistics (
skbio.math.stats.spatial
)
Gradient analyses (
skbio.math.gradient
)
Subsampling (
skbio.math.subsample
)
Parse biological sequences (
skbio.parse.sequences
)
I/O utils (
skbio.util.io
)
Miscellaneous Utilities (
skbio.util.misc
)
Testing utilities (
skbio.util.testing
)
Supporting Python 2 and Python 3
Coding guidelines
Adding a new module to skbio
Page
I/O utils (
skbio.util.io
)
Functions
I/O utils (
skbio.util.io
)
¶
This module provides utility functions to deal with files and I/O in general.
Functions
¶
open_file
(*args, **kwds)
Context manager, like
open
, but lets file handles and file like objects pass untouched.
