Evolutionary statistics (skbio.stats.evolve)

This package contains statistics pertaining to phylogenies and evolution.

Cophylogenetic methods

These functions test for correlation between phylogenies or representations of evolutionary distance (for example, genetic distance matrices).

Functions

hommola_cospeciation(host_dist, par_dist, ...) Perform Hommola et al (2009) host/parasite cospeciation test.